IL_8UT0_224
3D structure
- PDB id
- 8UT0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1, eIF5A and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.22 Å
Loop
- Sequence
- CU*AAG
- Length
- 5 nucleotides
- Bulged bases
- 8UT0|1|B|A|64
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UT0_224 not in the Motif Atlas
- Homologous match to IL_8P9A_364
- Geometric discrepancy: 0.1598
- The information below is about IL_8P9A_364
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 134
Unit IDs
8UT0|1|B|C|15
8UT0|1|B|U|16
*
8UT0|1|B|A|63
8UT0|1|B|A|64
8UT0|1|B|G|65
Current chains
- Chain B
- 5S rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain LG
- 60S ribosomal protein L5
- Chain LL
- 60S ribosomal protein L10
- Chain LM
- 60S ribosomal protein L11-B
Coloring options: