IL_8UTI_025
3D structure
- PDB id
- 8UTI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Eukaryotic 80S ribosome with Reh1 and A/P site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.13 Å
Loop
- Sequence
- GAAAG*CUAGUAGC
- Length
- 13 nucleotides
- Bulged bases
- 8UTI|1|A|A|933, 8UTI|1|A|G|937
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTI_025 not in the Motif Atlas
- Homologous match to IL_8C3A_030
- Geometric discrepancy: 0.0675
- The information below is about IL_8C3A_030
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_17470.7
- Basepair signature
- cWW-tWW-L-R-tWH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8UTI|1|A|G|805
8UTI|1|A|A|806
8UTI|1|A|A|807
8UTI|1|A|A|808
8UTI|1|A|G|809
*
8UTI|1|A|C|931
8UTI|1|A|U|932
8UTI|1|A|A|933
8UTI|1|A|G|934
8UTI|1|A|U|935
8UTI|1|A|A|936
8UTI|1|A|G|937
8UTI|1|A|C|938
Current chains
- Chain A
- 25S rRNA
Nearby chains
- Chain LF
- 60S ribosomal protein L4-A
- Chain LN
- 60S ribosomal protein L13-A
- Chain LP
- 60S ribosomal protein L15-A
- Chain Lc
- 60S ribosomal protein L28
- Chain Ll
- 60S ribosomal protein L37-A
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