IL_8UTI_075

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

GCU*AAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_075 not in the Motif Atlas

Homologous match to IL_8P9A_308

Geometric discrepancy: 0.1152

The information below is about IL_8P9A_308

Detailed Annotation

Isolated non-canonical cWW pair

Broad Annotation

No text annotation

Motif group

IL_01003.1

Basepair signature

cWW-cWW-cWW

Number of instances in this motif group

174

Unit IDs

8UTI|1|A|G|1940
8UTI|1|A|C|1941
8UTI|1|A|U|1942
*
8UTI|1|A|A|2106
8UTI|1|A|A|2107
8UTI|1|A|C|2108

Current chains

Chain A

25S rRNA

Nearby chains

Chain E

Small subunit ribosomal RNA; SSU rRNA

Chain LT

60S ribosomal protein L19-A

Chain SV

40S ribosomal protein S8-A