IL_8UTI_122

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

CUUG*CUUG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_122 not in the Motif Atlas

Homologous match to IL_8P9A_355

Geometric discrepancy: 0.1133

The information below is about IL_8P9A_355

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.1

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

29

Unit IDs

8UTI|1|A|C|3235
8UTI|1|A|U|3236
8UTI|1|A|U|3237
8UTI|1|A|G|3238
*
8UTI|1|A|C|3249
8UTI|1|A|U|3250
8UTI|1|A|U|3251
8UTI|1|A|G|3252

Current chains

Chain A

25S rRNA

Nearby chains

Chain LQ

60S ribosomal protein L16-A