IL_8UTI_201

3D structure

PDB id

8UTI (explore in PDB, NAKB, or RNA 3D Hub)

Description

Eukaryotic 80S ribosome with Reh1 and A/P site tRNA

Experimental method

ELECTRON MICROSCOPY

Resolution

3.13 Å

Loop

Sequence

ACA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTI_201 not in the Motif Atlas

Homologous match to IL_8C3A_454

Geometric discrepancy: 0.2292

The information below is about IL_8C3A_454

Detailed Annotation

Other IL

Broad Annotation

Other IL

Motif group

IL_10167.3

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

49

Unit IDs

8UTI|1|E|A|1234
8UTI|1|E|C|1235
8UTI|1|E|A|1236
*
8UTI|1|E|U|1249
8UTI|1|E|U|1250
8UTI|1|E|U|1251

Current chains

Chain E

18S rRNA

Nearby chains

Chain SE

40S ribosomal protein S15

Chain SM

40S ribosomal protein S29-A

Chain SN

40S ribosomal protein S31