IL_8UTJ_076
3D structure
- PDB id
- 8UTJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- UUAAUUGAUG*UUGAUCGAAG
- Length
- 20 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UTJ_076 not in the Motif Atlas
- Geometric match to IL_5J7L_387
- Geometric discrepancy: 0.2016
- The information below is about IL_5J7L_387
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_61249.1
- Basepair signature
- cWW-L-R-L-R-tHS-cWW-cWW-tSH-tHS-cWW-cWW
- Number of instances in this motif group
- 1
Unit IDs
8UTJ|1|1|U|1851
8UTJ|1|1|U|1852
8UTJ|1|1|A|1853
8UTJ|1|1|A|1854
8UTJ|1|1|U|1855
8UTJ|1|1|U|1856
8UTJ|1|1|G|1857
8UTJ|1|1|A|1858
8UTJ|1|1|U|1859
8UTJ|1|1|G|1860
*
8UTJ|1|1|U|1882
8UTJ|1|1|U|1883
8UTJ|1|1|G|1884
8UTJ|1|1|A|1885
8UTJ|1|1|U|1886
8UTJ|1|1|C|1887
8UTJ|1|1|G|1888
8UTJ|1|1|A|1889
8UTJ|1|1|A|1890
8UTJ|1|1|G|1891
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain A
- Large ribosomal subunit protein uL1
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