IL_8UTJ_090

3D structure

PDB id

8UTJ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the 0 frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

CUUUGAAG*UGGAG

Length

13 nucleotides

Bulged bases

8UTJ|1|1|U|2131, 8UTJ|1|1|U|2132

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UTJ_090 not in the Motif Atlas

Geometric match to IL_7A0S_043

Geometric discrepancy: 0.373

The information below is about IL_7A0S_043

Detailed Annotation

Kink-turn

Broad Annotation

No text annotation

Motif group

IL_90775.2

Basepair signature

cWW-tSS-tSH-L-tHS-tHS-cWW

Number of instances in this motif group

30

Unit IDs

8UTJ|1|1|C|2129
8UTJ|1|1|U|2130
8UTJ|1|1|U|2131
8UTJ|1|1|U|2132
8UTJ|1|1|G|2133
8UTJ|1|1|A|2134
8UTJ|1|1|A|2135
8UTJ|1|1|G|2136
*
8UTJ|1|1|U|2155
8UTJ|1|1|G|2156
8UTJ|1|1|G|2157
8UTJ|1|1|A|2158
8UTJ|1|1|G|2159

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain A

Large ribosomal subunit protein uL1