IL_8UU5_043

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

GUUG*CACC

Length

8 nucleotides

Bulged bases

8UU5|1|A|U|1107

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UU5_043 not in the Motif Atlas

Homologous match to IL_5J7L_285

Geometric discrepancy: 0.3652

The information below is about IL_5J7L_285

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_92446.2

Basepair signature

cWW-cWW-R-L-L

Number of instances in this motif group

5

Unit IDs

8UU5|1|A|G|1105
8UU5|1|A|U|1106
8UU5|1|A|U|1107
8UU5|1|A|G|1108
*
8UU5|1|A|C|1122
8UU5|1|A|A|1123
8UU5|1|A|C|1124
8UU5|1|A|C|1125

Current chains

Chain A

23S Ribosomal RNA

Nearby chains