IL_8UU5_058

3D structure

PDB id

8UU5 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with pe/E-tRNA (structure I-B)

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

AUAG*UGAUU

Length

9 nucleotides

Bulged bases

8UU5|1|A|U|1606

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UU5_058 not in the Motif Atlas

Homologous match to IL_7RQB_057

Geometric discrepancy: 0.1344

The information below is about IL_7RQB_057

Detailed Annotation

tSH-tHW

Broad Annotation

No text annotation

Motif group

IL_04059.1

Basepair signature

cWW-tWH-tHS-cWW

Number of instances in this motif group

13

Unit IDs

8UU5|1|A|A|1487
8UU5|1|A|U|1488
8UU5|1|A|A|1489
8UU5|1|A|G|1490
*
8UU5|1|A|U|1603
8UU5|1|A|G|1604
8UU5|1|A|A|1605
8UU5|1|A|U|1606
8UU5|1|A|U|1607

Current chains

Chain A

23S Ribosomal RNA

Nearby chains