IL_8UU7_091
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GGAG*CAAUGGUGGGAUAC
- Length
- 18 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU7_091 not in the Motif Atlas
- Homologous match to IL_3U4M_003
- Geometric discrepancy: 0.3242
- The information below is about IL_3U4M_003
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_75283.2
- Basepair signature
- cWW-tSS-L-R-L-tHS-L-cWW-L-tWH-tWH-L-L-R
- Number of instances in this motif group
- 3
Unit IDs
8UU7|1|A|G|2157
8UU7|1|A|G|2158
8UU7|1|A|A|2159
8UU7|1|A|G|2160
*
8UU7|1|A|C|2194
8UU7|1|A|A|2195
8UU7|1|A|A|2196
8UU7|1|A|U|2197
8UU7|1|A|G|2198
8UU7|1|A|G|2199
8UU7|1|A|U|2200
8UU7|1|A|G|2201
8UU7|1|A|G|2202
8UU7|1|A|G|2203
8UU7|1|A|A|2204
8UU7|1|A|U|2205
8UU7|1|A|A|2206
8UU7|1|A|C|2207
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain y
- Transfer RNA; tRNA
Coloring options: