IL_8UU7_151
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GA*UGAC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU7_151 not in the Motif Atlas
- Homologous match to IL_4LFB_027
- Geometric discrepancy: 0.1099
- The information below is about IL_4LFB_027
- Detailed Annotation
- Major groove platform; stack outside cWW
- Broad Annotation
- Major groove platform
- Motif group
- IL_74641.1
- Basepair signature
- cWW-tSH-cWW-L
- Number of instances in this motif group
- 32
Unit IDs
8UU7|1|a|G|662
8UU7|1|a|A|663
*
8UU7|1|a|U|759
8UU7|1|a|G|760
8UU7|1|a|A|761
8UU7|1|a|C|762
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain h
- Small ribosomal subunit protein uS8
- Chain o
- Small ribosomal subunit protein uS15
Coloring options: