IL_8UU7_166
3D structure
- PDB id
- 8UU7 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome in complex with HflXr, HPF, and E-site tRNA (structure II-B)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GUGCAU*AUGC
- Length
- 10 nucleotides
- Bulged bases
- 8UU7|1|a|C|1063
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU7_166 not in the Motif Atlas
- Geometric match to IL_4V88_473
- Geometric discrepancy: 0.3546
- The information below is about IL_4V88_473
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_36174.1
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 15
Unit IDs
8UU7|1|a|G|1060
8UU7|1|a|U|1061
8UU7|1|a|G|1062
8UU7|1|a|C|1063
8UU7|1|a|A|1064
8UU7|1|a|U|1065
*
8UU7|1|a|A|1211
8UU7|1|a|U|1212
8UU7|1|a|G|1213
8UU7|1|a|C|1214
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14
- Chain w
- Ribosome hibernation promoting factor
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