IL_8UU8_170

3D structure

PDB id

8UU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GGUCG*CCAAUCC

Length

12 nucleotides

Bulged bases

8UU8|1|a|A|1287, 8UU8|1|a|U|1288

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU8|1|a|G|1261
8UU8|1|a|G|1262
8UU8|1|a|U|1263
8UU8|1|a|C|1264
8UU8|1|a|G|1265
*
8UU8|1|a|C|1284
8UU8|1|a|C|1285
8UU8|1|a|A|1286
8UU8|1|a|A|1287
8UU8|1|a|U|1288
8UU8|1|a|C|1289
8UU8|1|a|C|1290

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain j

Small ribosomal subunit protein uS10

Chain n

Small ribosomal subunit protein uS14