IL_8UU8_173

3D structure

PDB id

8UU8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGAUUG*CAUGAAG

Length

14 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UU8|1|a|C|1310
8UU8|1|a|G|1311
8UU8|1|a|G|1312
8UU8|1|a|A|1313
8UU8|1|a|U|1314
8UU8|1|a|U|1315
8UU8|1|a|G|1316
*
8UU8|1|a|C|1335
8UU8|1|a|A|1336
8UU8|1|a|U|1337
8UU8|1|a|G|1338
8UU8|1|a|A|1339
8UU8|1|a|A|1340
8UU8|1|a|G|1341

Current chains

Chain a

16S Ribosomal RNA

Nearby chains

Chain m

Small ribosomal subunit protein uS13