IL_8UU8_177
3D structure
- PDB id
- 8UU8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-C)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CAC*GAAG
- Length
- 7 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU8_177 not in the Motif Atlas
- Geometric match to IL_2O3X_003
- Geometric discrepancy: 0.2104
- The information below is about IL_2O3X_003
- Detailed Annotation
- Decoding loop related
- Broad Annotation
- Decoding loop related
- Motif group
- IL_61702.1
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 6
Unit IDs
8UU8|1|a|C|1414
8UU8|1|a|A|1415
8UU8|1|a|C|1416
*
8UU8|1|a|G|1499
8UU8|1|a|A|1500
8UU8|1|a|A|1501
8UU8|1|a|G|1502
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain l
- Small ribosomal subunit protein uS12
- Chain v
- GTPase HflX
- Chain w
- F-Stop mRNA
Coloring options: