IL_8UU9_041
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CUUAGACAA*UCGAG
- Length
- 14 nucleotides
- Bulged bases
- 8UU9|1|A|A|1092
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU9_041 not in the Motif Atlas
- Homologous match to IL_5J7L_284
- Geometric discrepancy: 0.2081
- The information below is about IL_5J7L_284
- Detailed Annotation
- Kink-turn
- Broad Annotation
- No text annotation
- Motif group
- IL_99692.2
- Basepair signature
- cWW-tSS-tSH-L-R-R-L-cWW-L-L
- Number of instances in this motif group
- 6
Unit IDs
8UU9|1|A|C|1089
8UU9|1|A|U|1090
8UU9|1|A|U|1091
8UU9|1|A|A|1092
8UU9|1|A|G|1093
8UU9|1|A|A|1094
8UU9|1|A|C|1095
8UU9|1|A|A|1096
8UU9|1|A|A|1097
*
8UU9|1|A|U|1154
8UU9|1|A|C|1155
8UU9|1|A|G|1156
8UU9|1|A|A|1157
8UU9|1|A|G|1158
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain G
- Large ribosomal subunit protein uL6
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