IL_8UU9_128
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GGAUAAC*GCUAAUAC
- Length
- 15 nucleotides
- Bulged bases
- 8UU9|1|a|U|172
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU9_128 not in the Motif Atlas
- Homologous match to IL_5J7L_012
- Geometric discrepancy: 0.1246
- The information below is about IL_5J7L_012
- Detailed Annotation
- tWH-tWH-tHW-tHW
- Broad Annotation
- No text annotation
- Motif group
- IL_80604.6
- Basepair signature
- cWW-cWW-tWH-tWH-tHW-tHW-cWW
- Number of instances in this motif group
- 3
Unit IDs
8UU9|1|a|G|146
8UU9|1|a|G|147
8UU9|1|a|A|148
8UU9|1|a|U|149
8UU9|1|a|A|150
8UU9|1|a|A|151
8UU9|1|a|C|152
*
8UU9|1|a|G|167
8UU9|1|a|C|168
8UU9|1|a|U|169
8UU9|1|a|A|170
8UU9|1|a|A|171
8UU9|1|a|U|172
8UU9|1|a|A|173
8UU9|1|a|C|174
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain t
- Small ribosomal subunit protein bS20
Coloring options: