IL_8UU9_164
3D structure
- PDB id
- 8UU9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the ratcheted Listeria innocua 70S ribosome (head-swiveled) in complex with HflXr and pe/E-tRNA (structure II-D)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GUC*GUC
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UU9_164 not in the Motif Atlas
- Geometric match to IL_4V83_235
- Geometric discrepancy: 0.1881
- The information below is about IL_4V83_235
- Detailed Annotation
- Isolated non-canonical cWW pair
- Broad Annotation
- No text annotation
- Motif group
- IL_01003.1
- Basepair signature
- cWW-cWW-cWW
- Number of instances in this motif group
- 174
Unit IDs
8UU9|1|a|G|1070
8UU9|1|a|U|1071
8UU9|1|a|C|1072
*
8UU9|1|a|G|1200
8UU9|1|a|U|1201
8UU9|1|a|C|1202
Current chains
- Chain a
- 16S Ribosomal RNA
Nearby chains
- Chain c
- Small ribosomal subunit protein uS3
- Chain e
- Small ribosomal subunit protein uS5
- Chain j
- Small ribosomal subunit protein uS10
- Chain n
- Small ribosomal subunit protein uS14
Coloring options: