IL_8UVR_053
3D structure
- PDB id
- 8UVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with spectinomycin, mRNA, deacylated A- and E-site tRNAphe, and deacylated P-site tRNAmet at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAAG*CGUAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UVR_053 not in the Motif Atlas
- Homologous match to IL_8VTW_052
- Geometric discrepancy: 0.145
- The information below is about IL_8VTW_052
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_22281.1
- Basepair signature
- cWW-L-R-tWW-tHS-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UVR|1|1A|U|1357
8UVR|1|1A|G|1358
8UVR|1|1A|A|1359
8UVR|1|1A|A|1360
8UVR|1|1A|G|1361
*
8UVR|1|1A|C|1370
8UVR|1|1A|G|1371
8UVR|1|1A|U|1372
8UVR|1|1A|A|1373
8UVR|1|1A|G|1374
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
- Chain 11
- 50S ribosomal protein L28
- Chain 17
- 50S ribosomal protein L34
- Chain 1D
- 50S ribosomal protein L2
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