IL_8UX8_011

3D structure

PDB id

8UX8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GAAC*GGAGUGAAAAAGAAC

Length

19 nucleotides

Bulged bases

8UX8|1|1|A|504, 8UX8|1|1|A|508

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8UX8|1|1|G|481
8UX8|1|1|A|482
8UX8|1|1|A|483
8UX8|1|1|C|484
*
8UX8|1|1|G|495
8UX8|1|1|G|496
8UX8|1|1|A|497
8UX8|1|1|G|498
8UX8|1|1|U|499
8UX8|1|1|G|500
8UX8|1|1|A|501
8UX8|1|1|A|502
8UX8|1|1|A|503
8UX8|1|1|A|504
8UX8|1|1|A|505
8UX8|1|1|G|506
8UX8|1|1|A|507
8UX8|1|1|A|508
8UX8|1|1|C|509

Current chains

Chain 1

23S rRNA

Nearby chains

Chain S

50S ribosomal protein L22

Chain U

50S ribosomal protein L24