IL_8UX8_077
3D structure
- PDB id
- 8UX8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) bound to slippery P-site CCC-C codon in the +1 mRNA reading frame
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- CGAAA(5MU)UCCUUG*C(5MC)UG
- Length
- 16 nucleotides
- Bulged bases
- 8UX8|1|1|A|1938, 8UX8|1|1|U|1944
- QA status
- Modified nucleotides: 5MU, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8UX8|1|1|C|1934
8UX8|1|1|G|1935
8UX8|1|1|A|1936
8UX8|1|1|A|1937
8UX8|1|1|A|1938
8UX8|1|1|5MU|1939
8UX8|1|1|U|1940
8UX8|1|1|C|1941
8UX8|1|1|C|1942
8UX8|1|1|U|1943
8UX8|1|1|U|1944
8UX8|1|1|G|1945
*
8UX8|1|1|C|1961
8UX8|1|1|5MC|1962
8UX8|1|1|U|1963
8UX8|1|1|G|1964
Current chains
- Chain 1
- 23S rRNA
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain B
- 50S ribosomal protein L2
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