IL_8UXA_020

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAAAU*AUAA

Length

9 nucleotides

Bulged bases

8UXA|1|A|A|736

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_020 not in the Motif Atlas

Geometric match to IL_6GYV_002

Geometric discrepancy: 0.2814

The information below is about IL_6GYV_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_15225.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

39

Unit IDs

8UXA|1|A|U|734
8UXA|1|A|A|735
8UXA|1|A|A|736
8UXA|1|A|A|737
8UXA|1|A|U|738
*
8UXA|1|A|A|858
8UXA|1|A|U|859
8UXA|1|A|A|860
8UXA|1|A|A|861

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain 7

Large ribosomal subunit protein mL49

Chain U

Large ribosomal subunit protein uL30m