IL_8UXA_023
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGGUAC*GAAAUA
- Length
- 12 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_023 not in the Motif Atlas
- Geometric match to IL_8GLP_291
- Geometric discrepancy: 0.225
- The information below is about IL_8GLP_291
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_46203.1
- Basepair signature
- cWW-L-R-L-R-L-R-L-R-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UXA|1|A|U|780
8UXA|1|A|G|781
8UXA|1|A|G|782
8UXA|1|A|U|783
8UXA|1|A|A|784
8UXA|1|A|C|785
*
8UXA|1|A|G|841
8UXA|1|A|A|842
8UXA|1|A|A|843
8UXA|1|A|A|844
8UXA|1|A|U|845
8UXA|1|A|A|846
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain E
- Large ribosomal subunit protein uL5m
- Chain K
- Large ribosomal subunit protein uL16m
- Chain R
- Large ribosomal subunit protein bL27m
- Chain U
- Large ribosomal subunit protein uL30m
- Chain c
- Large ribosomal subunit protein mL60
Coloring options: