IL_8UXA_036
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- AUGAGUAA*UGAAAUU
- Length
- 15 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_036 not in the Motif Atlas
- Geometric match to IL_8B0X_108
- Geometric discrepancy: 0.0975
- The information below is about IL_8B0X_108
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_62167.3
- Basepair signature
- cWW-cWW-tSH-cSH-R-tWH-tHS-cWW
- Number of instances in this motif group
- 20
Unit IDs
8UXA|1|A|A|1295
8UXA|1|A|U|1296
8UXA|1|A|G|1297
8UXA|1|A|A|1298
8UXA|1|A|G|1299
8UXA|1|A|U|1300
8UXA|1|A|A|1301
8UXA|1|A|A|1302
*
8UXA|1|A|U|1911
8UXA|1|A|G|1912
8UXA|1|A|A|1913
8UXA|1|A|A|1914
8UXA|1|A|A|1915
8UXA|1|A|U|1916
8UXA|1|A|U|1917
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain 3
- Large ribosomal subunit protein mL41
- Chain D
- Large ribosomal subunit protein uL4m
- Chain O
- Large ribosomal subunit protein uL22m
- Chain W
- Large ribosomal subunit protein bL32m
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