IL_8UXA_044

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAUAAU*AGC

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_044 not in the Motif Atlas

Geometric match to IL_9DFE_063

Geometric discrepancy: 0.2486

The information below is about IL_9DFE_063

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12566.5

Basepair signature

cWW-L-tHS-L-cWW-L

Number of instances in this motif group

6

Unit IDs

8UXA|1|A|G|1603
8UXA|1|A|A|1604
8UXA|1|A|U|1605
8UXA|1|A|A|1606
8UXA|1|A|A|1607
8UXA|1|A|U|1608
*
8UXA|1|A|A|1904
8UXA|1|A|G|1905
8UXA|1|A|C|1906

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain C

Large ribosomal subunit protein uL3m

Chain L

Large ribosomal subunit protein bL17m