IL_8UXA_046

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GGAA*UC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_046 not in the Motif Atlas

Geometric match to IL_8B0X_125

Geometric discrepancy: 0.07

The information below is about IL_8B0X_125

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_74641.2

Basepair signature

cWW-tSH-cWW-L

Number of instances in this motif group

33

Unit IDs

8UXA|1|A|G|1618
8UXA|1|A|G|1619
8UXA|1|A|A|1620
8UXA|1|A|A|1621
*
8UXA|1|A|U|1893
8UXA|1|A|C|1894

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain C

Large ribosomal subunit protein uL3m

Chain I

Large ribosomal subunit protein uL14m