IL_8UXA_083

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CCCAU*AAG

Length

8 nucleotides

Bulged bases

8UXA|1|A|A|3062

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_083 not in the Motif Atlas

Geometric match to IL_9DFE_103

Geometric discrepancy: 0.1806

The information below is about IL_9DFE_103

Detailed Annotation

C-loop

Broad Annotation

No text annotation

Motif group

IL_63596.12

Basepair signature

cWW-cWS-cSH-tWH-cWW-L

Number of instances in this motif group

22

Unit IDs

8UXA|1|A|C|2947
8UXA|1|A|C|2948
8UXA|1|A|C|2949
8UXA|1|A|A|2950
8UXA|1|A|U|2951
*
8UXA|1|A|A|3061
8UXA|1|A|A|3062
8UXA|1|A|G|3063

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain C

Large ribosomal subunit protein uL3m

Chain I

Large ribosomal subunit protein uL14m

Chain M

Large ribosomal subunit protein bL19m