IL_8UXA_084
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAU*AUAAG
- Length
- 10 nucleotides
- Bulged bases
- 8UXA|1|A|U|2956
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_084 not in the Motif Atlas
- Geometric match to IL_9E6Q_097
- Geometric discrepancy: 0.1462
- The information below is about IL_9E6Q_097
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_45790.2
- Basepair signature
- cWW-tSH-L-tHS-cWW
- Number of instances in this motif group
- 12
Unit IDs
8UXA|1|A|U|2954
8UXA|1|A|G|2955
8UXA|1|A|U|2956
8UXA|1|A|A|2957
8UXA|1|A|U|2958
*
8UXA|1|A|A|3054
8UXA|1|A|U|3055
8UXA|1|A|A|3056
8UXA|1|A|A|3057
8UXA|1|A|G|3058
Current chains
- Chain A
- Large ribosomal subunit rRNA
Nearby chains
- Chain C
- Large ribosomal subunit protein uL3m
- Chain I
- Large ribosomal subunit protein uL14m
- Chain L
- Large ribosomal subunit protein bL17m
- Chain M
- Large ribosomal subunit protein bL19m
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