IL_8UXA_089

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAU*AUA

Length

6 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_089 not in the Motif Atlas

Geometric match to IL_4KTG_003

Geometric discrepancy: 0.1118

The information below is about IL_4KTG_003

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

8UXA|1|A|U|3163
8UXA|1|A|A|3164
8UXA|1|A|U|3165
*
8UXA|1|A|A|3240
8UXA|1|A|U|3241
8UXA|1|A|A|3242

Current chains

Chain A

Large ribosomal subunit rRNA

Nearby chains

Chain C

Large ribosomal subunit protein uL3m

Chain L

Large ribosomal subunit protein bL17m

Chain M

Large ribosomal subunit protein bL19m