IL_8UXA_097

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CG*UAUG

Length

6 nucleotides

Bulged bases

8UXA|1|AL|A|100, 8UXA|1|AL|U|101

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_097 not in the Motif Atlas

Geometric match to IL_4YAZ_008

Geometric discrepancy: 0.2553

The information below is about IL_4YAZ_008

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.2

Basepair signature

cWW-cWW

Number of instances in this motif group

35

Unit IDs

8UXA|1|AL|C|74
8UXA|1|AL|G|75
*
8UXA|1|AL|U|99
8UXA|1|AL|A|100
8UXA|1|AL|U|101
8UXA|1|AL|G|102

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AB

Small ribosomal subunit protein mS41

Chain AE

37S ribosomal protein MRP13, mitochondrial