IL_8UXA_103

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAUAU*AUAUA

Length

10 nucleotides

Bulged bases

None detected

QA status

Self-complementary:

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_103 not in the Motif Atlas

Geometric match to IL_9JA9_001

Geometric discrepancy: 0.309

The information below is about IL_9JA9_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_71154.3

Basepair signature

cWW-cWW-cWW-cWW-cWW

Number of instances in this motif group

17

Unit IDs

8UXA|1|AL|U|206
8UXA|1|AL|A|207
8UXA|1|AL|U|208
8UXA|1|AL|A|209
8UXA|1|AL|U|210
*
8UXA|1|AL|A|214
8UXA|1|AL|U|215
8UXA|1|AL|A|216
8UXA|1|AL|U|217
8UXA|1|AL|A|218

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AE

37S ribosomal protein MRP13, mitochondrial