IL_8UXA_106
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- GAU*AGAAC
- Length
- 8 nucleotides
- Bulged bases
- 8UXA|1|AL|A|298
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_106 not in the Motif Atlas
- Geometric match to IL_8GLP_301
- Geometric discrepancy: 0.2013
- The information below is about IL_8GLP_301
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_06671.1
- Basepair signature
- cWW-L-cWW-L-L
- Number of instances in this motif group
- 10
Unit IDs
8UXA|1|AL|G|297
8UXA|1|AL|A|298
8UXA|1|AL|U|299
*
8UXA|1|AL|A|310
8UXA|1|AL|G|311
8UXA|1|AL|A|312
8UXA|1|AL|A|313
8UXA|1|AL|C|314
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AF
- Small ribosomal subunit protein mS45
- Chain AH
- Small ribosomal subunit protein mS26
- Chain r
- Small ribosomal subunit protein uS12m
- Chain v
- Small ribosomal subunit protein bS16m
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