IL_8UXA_115
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UUUAAAG*CA
- Length
- 9 nucleotides
- Bulged bases
- 8UXA|1|AL|A|681
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_115 not in the Motif Atlas
- Homologous match to IL_6CZR_134
- Geometric discrepancy: 0.2423
- The information below is about IL_6CZR_134
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_38186.5
- Basepair signature
- cWW-L-cWW-L-L-R
- Number of instances in this motif group
- 5
Unit IDs
8UXA|1|AL|U|678
8UXA|1|AL|U|679
8UXA|1|AL|U|680
8UXA|1|AL|A|681
8UXA|1|AL|A|682
8UXA|1|AL|A|683
8UXA|1|AL|G|684
*
8UXA|1|AL|C|945
8UXA|1|AL|A|946
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AA
- Small ribosomal subunit protein mS38
- Chain k
- Small ribosomal subunit protein uS5m
- Chain n
- 37S ribosomal protein S8, mitochondrial
- Chain r
- Small ribosomal subunit protein uS12m
- Chain w
- 37S ribosomal protein S17, mitochondrial
Coloring options: