IL_8UXA_132
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UG*CAA
- Length
- 5 nucleotides
- Bulged bases
- 8UXA|1|AL|A|1228
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_132 not in the Motif Atlas
- Homologous match to IL_6CZR_156
- Geometric discrepancy: 0.2441
- The information below is about IL_6CZR_156
- Detailed Annotation
- Single bulged U
- Broad Annotation
- No text annotation
- Motif group
- IL_89505.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 123
Unit IDs
8UXA|1|AL|U|1107
8UXA|1|AL|G|1108
*
8UXA|1|AL|C|1227
8UXA|1|AL|A|1228
8UXA|1|AL|A|1229
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain AN
- mRNA
- Chain i
- Ribosomal protein VAR1, mitochondrial
- Chain k
- Small ribosomal subunit protein uS5m
- Chain p
- Small ribosomal subunit protein uS10m
- Chain t
- 37S ribosomal protein MRP2, mitochondrial
Coloring options: