IL_8UXA_136

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

AUA*UUU

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_136 not in the Motif Atlas

Geometric match to IL_8AF0_002

Geometric discrepancy: 0.264

The information below is about IL_8AF0_002

Detailed Annotation

Isolated cWH basepair

Broad Annotation

No text annotation

Motif group

IL_10892.2

Basepair signature

cWW-cHW-cWW

Number of instances in this motif group

58

Unit IDs

8UXA|1|AL|A|1347
8UXA|1|AL|U|1348
8UXA|1|AL|A|1349
*
8UXA|1|AL|U|1354
8UXA|1|AL|U|1355
8UXA|1|AL|U|1356

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain AI

Small ribosomal subunit protein mS29