IL_8UXA_145
3D structure
- PDB id
- 8UXA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CUUAUU*AUCAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8UXA_145 not in the Motif Atlas
- Geometric match to IL_8B0X_062
- Geometric discrepancy: 0.3226
- The information below is about IL_8B0X_062
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_67427.1
- Basepair signature
- cWW-cWW-L-R-L-R-cWW-cWW
- Number of instances in this motif group
- 2
Unit IDs
8UXA|1|AL|C|1498
8UXA|1|AL|U|1499
8UXA|1|AL|U|1500
8UXA|1|AL|A|1501
8UXA|1|AL|U|1502
8UXA|1|AL|U|1503
*
8UXA|1|AL|A|1559
8UXA|1|AL|U|1560
8UXA|1|AL|C|1561
8UXA|1|AL|A|1562
8UXA|1|AL|G|1563
Current chains
- Chain AL
- Small ribosomal subunit rRNA
Nearby chains
- Chain A
- Large subunit ribosomal RNA; LSU rRNA
- Chain u
- Small ribosomal subunit protein uS15m
Coloring options: