IL_8B0X_062

3D structure

PDB id

8B0X (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 70S ribosome in the unrotated state (P and E, tRNAs)

Experimental method

ELECTRON MICROSCOPY

Resolution

1.55 Å

Loop

Sequence

AAGAAG*CCACU

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_67427.1

Basepair signature

cWW-cWW-L-R-L-R-cWW-cWW

Number of instances in this motif group

2

Unit IDs

8B0X|1|A|A|1430
8B0X|1|A|A|1431
8B0X|1|A|G|1432
8B0X|1|A|A|1433
8B0X|1|A|A|1434
8B0X|1|A|G|1435
*
8B0X|1|A|C|1466
8B0X|1|A|C|1467
8B0X|1|A|A|1468
8B0X|1|A|C|1469
8B0X|1|A|U|1470

Current chains

Chain A

16S rRNA

Nearby chains

Chain T

30S ribosomal protein S20

Chain a

Large subunit ribosomal RNA; LSU rRNA

Chain j

50S ribosomal protein L14

Chain o

50S ribosomal protein L19