IL_8UXA_146

3D structure

PDB id

8UXA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Glucose treated mitochondrial ribosome of saccharomyces cerevisiae class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UUUA*UUUA

Length

8 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXA_146 not in the Motif Atlas

Geometric match to IL_6MWN_005

Geometric discrepancy: 0.1942

The information below is about IL_6MWN_005

Detailed Annotation

Tandem non-canonical cWW pairs

Broad Annotation

No text annotation

Motif group

IL_71194.2

Basepair signature

cWW-cWW-cWW-cWW

Number of instances in this motif group

35

Unit IDs

8UXA|1|AL|U|1505
8UXA|1|AL|U|1506
8UXA|1|AL|U|1507
8UXA|1|AL|A|1508
*
8UXA|1|AL|U|1554
8UXA|1|AL|U|1555
8UXA|1|AL|U|1556
8UXA|1|AL|A|1557

Current chains

Chain AL

Small ribosomal subunit rRNA

Nearby chains

Chain M

Large ribosomal subunit protein bL19m

Chain u

Small ribosomal subunit protein uS15m