IL_8UXB_094

3D structure

PDB id

8UXB (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

CUGA*UGG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UXB_094 not in the Motif Atlas

Geometric match to IL_6DME_003

Geometric discrepancy: 0.2541

The information below is about IL_6DME_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_75527.1

Basepair signature

cWW-cWW-cSH-cWW

Number of instances in this motif group

10

Unit IDs

8UXB|1|1|C|2456
8UXB|1|1|U|2457
8UXB|1|1|G|2458
8UXB|1|1|A|2459
*
8UXB|1|1|U|2493
8UXB|1|1|G|2494
8UXB|1|1|G|2495

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L16