IL_8UZ3_023

3D structure

PDB id

8UZ3 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UC*GUUA

Length

6 nucleotides

Bulged bases

8UZ3|1|1|U|931, 8UZ3|1|1|U|932

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UZ3_023 not in the Motif Atlas

Geometric match to IL_1R3E_001

Geometric discrepancy: 0.3036

The information below is about IL_1R3E_001

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_44609.1

Basepair signature

cWW-cWW

Number of instances in this motif group

28

Unit IDs

8UZ3|1|1|U|847
8UZ3|1|1|C|848
*
8UZ3|1|1|G|930
8UZ3|1|1|U|931
8UZ3|1|1|U|932
8UZ3|1|1|A|933

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain Z

50S ribosomal protein L30