IL_8UZG_120

3D structure

PDB id

8UZG (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified e*/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GGAUAAC*GCUAAUAC

Length

15 nucleotides

Bulged bases

8UZG|1|2|U|173

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8UZG_120 not in the Motif Atlas

Geometric match to IL_5J7L_012

Geometric discrepancy: 0.1883

The information below is about IL_5J7L_012

Detailed Annotation

tWH-tWH-tHW-tHW

Broad Annotation

No text annotation

Motif group

IL_80604.6

Basepair signature

cWW-cWW-tWH-tWH-tHW-tHW-cWW

Number of instances in this motif group

3

Unit IDs

8UZG|1|2|G|147
8UZG|1|2|G|148
8UZG|1|2|A|149
8UZG|1|2|U|150
8UZG|1|2|A|151
8UZG|1|2|A|152
8UZG|1|2|C|153
*
8UZG|1|2|G|168
8UZG|1|2|C|169
8UZG|1|2|U|170
8UZG|1|2|A|171
8UZG|1|2|A|172
8UZG|1|2|U|173
8UZG|1|2|A|174
8UZG|1|2|C|175

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain y

30S ribosomal protein S20