IL_8V03_051

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CGAAG*CUAAG

Length

10 nucleotides

Bulged bases

8V03|1|1|A|1420

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8V03_051 not in the Motif Atlas

Geometric match to IL_8CRE_129

Geometric discrepancy: 0.2051

The information below is about IL_8CRE_129

Detailed Annotation

UAA/GAN

Broad Annotation

No text annotation

Motif group

IL_38507.2

Basepair signature

cWW-tWH-L-tHS-cWW

Number of instances in this motif group

16

Unit IDs

8V03|1|1|C|1417
8V03|1|1|G|1418
8V03|1|1|A|1419
8V03|1|1|A|1420
8V03|1|1|G|1421
*
8V03|1|1|C|1577
8V03|1|1|U|1578
8V03|1|1|A|1579
8V03|1|1|A|1580
8V03|1|1|G|1581

Current chains

Chain 1

23S ribosomal RNA

Nearby chains