IL_8V03_132

3D structure

PDB id

8V03 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

4 Å

Loop

Sequence

CAG*CAGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8V03_132 not in the Motif Atlas

Geometric match to IL_5J7L_021

Geometric discrepancy: 0.2875

The information below is about IL_5J7L_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_33323.1

Basepair signature

cWW-L-R-L-cWW-L-L

Number of instances in this motif group

2

Unit IDs

8V03|1|2|C|440
8V03|1|2|A|441
8V03|1|2|G|442
*
8V03|1|2|C|492
8V03|1|2|A|493
8V03|1|2|G|494
8V03|1|2|A|495
8V03|1|2|A|496
8V03|1|2|G|497

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4