IL_8V03_182
3D structure
- PDB id
- 8V03 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified P/E-tRNAPro(GGG) bound to slippery P-site CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4 Å
Loop
- Sequence
- CGUC*GUCG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8V03_182 not in the Motif Atlas
- Geometric match to IL_4K27_001
- Geometric discrepancy: 0.238
- The information below is about IL_4K27_001
- Detailed Annotation
- Tandem non-canonical cWW pairs
- Broad Annotation
- No text annotation
- Motif group
- IL_15225.2
- Basepair signature
- cWW-cWW-cWW-cWW
- Number of instances in this motif group
- 39
Unit IDs
8V03|1|5|C|28
8V03|1|5|G|29
8V03|1|5|U|30
8V03|1|5|C|31
*
8V03|1|5|G|39
8V03|1|5|U|40
8V03|1|5|C|41
8V03|1|5|G|42
Current chains
- Chain 5
- tRNA ProL (GGG)
Nearby chains
- Chain 2
- Small subunit ribosomal RNA; SSU rRNA
- Chain 4
- mRNA
- Chain n
- Small ribosomal subunit protein uS9
- Chain r
- 30S ribosomal protein S13
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