IL_8V83_097
3D structure
- PDB id
- 8V83 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 60S ribosome biogenesis intermediate (Dbp10 pre-catalytic structure - Overall map)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.53 Å
Loop
- Sequence
- CUAUCAU*AAGCGUUG
- Length
- 15 nucleotides
- Bulged bases
- 8V83|1|1|C|2913, 8V83|1|1|U|2915
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8V83|1|1|C|2885
8V83|1|1|U|2886
8V83|1|1|A|2887
8V83|1|1|U|2888
8V83|1|1|C|2889
8V83|1|1|A|2890
8V83|1|1|U|2891
*
8V83|1|1|A|2910
8V83|1|1|A|2911
8V83|1|1|G|2912
8V83|1|1|C|2913
8V83|1|1|G|2914
8V83|1|1|U|2915
8V83|1|1|U|2916
8V83|1|1|G|2917
Current chains
- Chain 1
- Saccharomyces cerevisiae S288C 25S ribosomal RNA
Nearby chains
- Chain O
- Large ribosomal subunit protein uL13A
- Chain V
- 60S ribosomal protein L23-A
- Chain b
- Nucleolar GTP-binding protein 1
- Chain r
- Ribosome biogenesis protein NSA2
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