IL_8V9K_096

3D structure

PDB id

8V9K (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACUGUGAAGC*GUGGAGU

Length

17 nucleotides

Bulged bases

8V9K|1|A|U|2355

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8V9K|1|A|A|2351
8V9K|1|A|C|2352
8V9K|1|A|U|2353
8V9K|1|A|G|2354
8V9K|1|A|U|2355
8V9K|1|A|G|2356
8V9K|1|A|A|2357
8V9K|1|A|A|2358
8V9K|1|A|G|2359
8V9K|1|A|C|2360
*
8V9K|1|A|G|2377
8V9K|1|A|U|2378
8V9K|1|A|G|2379
8V9K|1|A|G|2380
8V9K|1|A|A|2381
8V9K|1|A|G|2382
8V9K|1|A|U|2383

Current chains

Chain A

23S Ribosomal RNA

Nearby chains

Chain K

Large ribosomal subunit protein uL1