IL_8V9L_106
3D structure
- PDB id
- 8V9L (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Msmeg1130 (Balon) and MsmegEF-Tu(GDP) (Composite structure 6)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3 Å
Loop
- Sequence
- CG*UGG
- Length
- 5 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8V9L_106 not in the Motif Atlas
- Homologous match to IL_7A0S_088
- Geometric discrepancy: 0.0952
- The information below is about IL_7A0S_088
- Detailed Annotation
- Major groove platform
- Broad Annotation
- No text annotation
- Motif group
- IL_07039.3
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 16
Unit IDs
8V9L|1|A|C|2731
8V9L|1|A|G|2732
*
8V9L|1|A|U|2804
8V9L|1|A|G|2805
8V9L|1|A|G|2806
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain D
- 50S ribosomal protein L3
- Chain z
- Ribosome hibernation factor Balon (MSMEG_1130)
Coloring options: