IL_8VFT_022
3D structure
- PDB id
- 8VFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 80S rabbit ribosome stalled by emetine with eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CC*GCG
- Length
- 5 nucleotides
- Bulged bases
- 8VFT|1|5|C|696
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VFT_022 not in the Motif Atlas
- Homologous match to IL_8GLP_024
- Geometric discrepancy: 0.4063
- The information below is about IL_8GLP_024
- Detailed Annotation
- Single bulged C
- Broad Annotation
- No text annotation
- Motif group
- IL_05642.6
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 72
Unit IDs
8VFT|1|5|C|459
8VFT|1|5|C|460
*
8VFT|1|5|G|695
8VFT|1|5|C|696
8VFT|1|5|G|697
Current chains
- Chain 5
- 28S rRNA
Nearby chains
- Chain E
- eL6
- Chain r
- eL28
Coloring options: