IL_8VFT_045

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

CGGG*CGUG

Length

8 nucleotides

Bulged bases

8VFT|1|5|G|1359

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|5|C|1357
8VFT|1|5|G|1358
8VFT|1|5|G|1359
8VFT|1|5|G|1360
*
8VFT|1|5|C|1379
8VFT|1|5|G|1380
8VFT|1|5|U|1381
8VFT|1|5|G|1382

Current chains

Chain 5

28S rRNA

Nearby chains

Chain C

uL4

Chain L

eL13

Chain N

eL15

Chain a

uL15