IL_8VFT_228

3D structure

PDB id

8VFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translating 80S rabbit ribosome stalled by emetine with eEF2

Experimental method

ELECTRON MICROSCOPY

Resolution

3.3 Å

Loop

Sequence

GACAGGAUUG*CUCGAUUC

Length

18 nucleotides

Bulged bases

8VFT|1|9|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VFT|1|9|G|1281
8VFT|1|9|A|1282
8VFT|1|9|C|1283
8VFT|1|9|A|1284
8VFT|1|9|G|1285
8VFT|1|9|G|1286
8VFT|1|9|A|1287
8VFT|1|9|U|1288
8VFT|1|9|U|1289
8VFT|1|9|G|1290
*
8VFT|1|9|C|1309
8VFT|1|9|U|1310
8VFT|1|9|C|1311
8VFT|1|9|G|1312
8VFT|1|9|A|1313
8VFT|1|9|U|1314
8VFT|1|9|U|1315
8VFT|1|9|C|1316

Current chains

Chain 9

18S rRNA

Nearby chains

Chain KK

eS10

Chain MM

eS12

Chain dd

uS14

Chain ff

eS31